Refining coarse-grained molecular topologies: a Bayesian optimization approach
Molecular Dynamics (MD) simulations are vital for predicting the physical and chemical properties of molecular systems across various ensembles. While All-Atom (AA) MD provides high accuracy, its computational cost has spurred the development of Coarse-Grained MD (CGMD), which simplifies molecular structures into representative beads to reduce expense but sacrifice precision. CGMD methods like Martini3, calibrated […]